C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | Berardinelli-Seip congenital lipodystrophy 2 homolog (seipin) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000160897  |
Bscl2-004 |
ENSMUSG00000071657 |
10090 | + |
19:8839390-8848638  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00089X | CIL_00089X_0002 | VISTA | 19:8644197-9245760 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000278893
|
BSCL2-008 | protein_coding | Homo_sapiens | 0 | 673 |
|
ENST00000301781
|
BSCL2-002 | nonsense_mediated_decay | Homo_sapiens | 0 | 1428 |
|
ENST00000360796
|
BSCL2-003 | protein_coding | Homo_sapiens | 0 | 782 |
|
ENST00000403550
|
BSCL2-006 | protein_coding | Homo_sapiens | 0 | 673 |
|
ENST00000403734
|
HNRNPUL2-BSCL2-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 739 |
|
ENST00000405837
|
BSCL2-001 | protein_coding | Homo_sapiens | 0 | 739 |
|
ENST00000407022
|
BSCL2-005 | protein_coding | Homo_sapiens | 0 | 673 |
|
ENST00000412351
|
BSCL2-015 | processed_transcript | Homo_sapiens | 9.94922e-44 | 180 |
|
ENST00000413908
|
BSCL2-010 | nonsense_mediated_decay | Homo_sapiens | 6e-38 | 161 |
|
ENST00000421906
|
BSCL2-004 | protein_coding | Homo_sapiens | 0 | 671 |
|
ENST00000448568
|
BSCL2-022 | protein_coding | Homo_sapiens | 0 | 673 |
|
ENST00000449636
|
BSCL2-012 | protein_coding | Homo_sapiens | 2e-33 | 147 |
|
ENST00000463679
|
BSCL2-011 | retained_intron | Homo_sapiens | 0 | 200 |
|
ENST00000468505
|
BSCL2-013 | retained_intron | Homo_sapiens | 0 | 416 |
|
ENST00000470529
|
BSCL2-014 | retained_intron | Homo_sapiens | 0 | 200 |
|
ENST00000524862
|
BSCL2-020 | protein_coding | Homo_sapiens | 0 | 739 |
|
ENST00000526426
|
BSCL2-028 | processed_transcript | Homo_sapiens | 2.99878e-43 | 178 |
|
ENST00000531524
|
BSCL2-023 | protein_coding | Homo_sapiens | 8.99634e-43 | 178 |
|
ENST00000532115
|
BSCL2-017 | processed_transcript | Homo_sapiens | 1.00053e-42 | 176 |
|
ENST00000532818
|
BSCL2-019 | protein_coding | Homo_sapiens | 0 | 401 |
|
ENST00000533982
|
BSCL2-024 | protein_coding | Homo_sapiens | 0 | 464 |
|
ENST00000537604
|
BSCL2-029 | processed_transcript | Homo_sapiens | 0 | 292 |
