C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: COMM domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000160959 Commd2-001 ENSMUSG00000036513 10090 - 3:57642904-57651693 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000160959
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000160959 1.916±0.38 1.092±0.24 1.398±0.89 1.244±0.63 1.298±0.49 1.650±0.52 0.566±0.10 1.457±0.24 1.275±0.46 2.558±0.41 0.510±0.04 2.214±1.00 0.901±0.27 0.522±0.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R8 CIL_0002R8_0002 CGP 3:57455649-57651715
CIL_0002R7 CIL_0002R7_0002 CGP 3:57642904-57692537

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000463077 COMMD2-007 retained_intron Homo_sapiens 0 623
ENST00000469896 COMMD2-003 retained_intron Homo_sapiens 0 505
ENST00000473414 COMMD2-001 protein_coding Homo_sapiens 0 693
ENST00000483146 COMMD2-008 retained_intron Homo_sapiens 0 235
ENST00000483708 COMMD2-006 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000491617 COMMD2-005 nonsense_mediated_decay Homo_sapiens 0 505

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