C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Eph receptor B3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161063 Ephb3-002 ENSMUSG00000005958 10090 + 16:21211095-21222967 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverMusclePlacentaENSMUST00000161063
Transcript ID Liver Muscle Placenta
ENSMUST00000161063 0.026±0.00 0.074±0.05 0.174±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005005 TAS transmembrane-ephrin receptor activity
GO:0005887 TAS integral component of plasma membrane
GO:0007411 IDA axon guidance
GO:0008046 IDA axon guidance receptor activity
GO:0021952 IDA central nervous system projection neuron axonogenesis
GO:0031290 IDA retinal ganglion cell axon guidance
GO:0048013 TAS ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050395 EPHB3 (2 of 2)-201 protein_coding Danio_rerio 0 843
ENST00000330394 EPHB3-001 protein_coding Homo_sapiens 0 3145
ENST00000473079 EPHB3-003 retained_intron Homo_sapiens 0 536

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