C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: complement factor H-related 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161224 Cfhr1-003 ENSMUSG00000057037 10090 - 1:139550682-139553599 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleENSMUST00000161224
Transcript ID Bladder Muscle
ENSMUST00000161224 0.034±0.00 0.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M0 CIL_0001M0_000A CGP 1:139501707-139560258

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320493 CFHR1-001 protein_coding Homo_sapiens 5e-27 126
ENST00000367415 CFHR2-001 protein_coding Homo_sapiens 7e-25 119
ENST00000367421 CFHR2-001 protein_coding Homo_sapiens 7e-25 119
ENST00000367424 CFHR1-002 protein_coding Homo_sapiens 1e-26 124
ENST00000367429 CFH-001 protein_coding Homo_sapiens 3e-28 132
ENST00000466229 CFH-004 retained_intron Homo_sapiens 6e-28 132
ENST00000473386 CFHR2-002 processed_transcript Homo_sapiens 4e-25 119
ENST00000476712 CFHR2-005 protein_coding Homo_sapiens 6e-25 119
ENST00000496448 CFHR2-006 processed_transcript Homo_sapiens 5e-25 119

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