C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptic vesicle glycoprotein 2c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161263 Sv2c-001 ENSMUSG00000051111 10090 - 13:95959443-96132577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161263
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161263 0.031±0.02 0.130±0.08 0.132±0.07 0.783±0.00 0.095±0.04 0.325±0.11 0.090±0.04 0.111±0.03 0.030±0.02 0.127±0.04 0.023±0.01 0.261±0.11 0.029±0.02 0.258±0.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006836 IEA neurotransmitter transport
GO:0007268 TAS synaptic transmission
GO:0008021 IDA synaptic vesicle
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0030054 IEA cell junction
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000155158 sv2c-201 protein_coding Danio_rerio 0 496
ENSDART00000084024 sv2c-001 protein_coding Danio_rerio 0 355
ENST00000322285 SV2C-002 protein_coding Homo_sapiens 0 2483
ENST00000502798 SV2C-001 protein_coding Homo_sapiens 0 2782
ENST00000506257 SV2C-004 retained_intron Homo_sapiens 0 281

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