C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ring finger protein (C3H2C3 type) 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000161331  |
Rnf6-004 |
ENSMUSG00000029634 |
10090 | - |
5:146211704-146220935  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004MF | CIL_0004MF_0002 | CGP | 5:146209192-146302874 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IDA | DNA binding |
| GO:0004842 | IDA | ubiquitin-protein transferase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0006511 | IDA | ubiquitin-dependent protein catabolic process |
| GO:0016605 | IDA | PML body |
| GO:0030424 | IDA | axon |
| GO:0030517 | IGI | negative regulation of axon extension |
| GO:0045893 | IDA | positive regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000346166
|
RNF6-001 | protein_coding | Homo_sapiens | 0 | 472 |
|
ENST00000381570
|
RNF6-002 | protein_coding | Homo_sapiens | 0 | 472 |
|
ENST00000381588
|
RNF6-006 | protein_coding | Homo_sapiens | 0 | 472 |
|
ENST00000468480
|
RNF6-007 | processed_transcript | Homo_sapiens | 0 | 383 |
|
ENST00000476347
|
RNF6-005 | processed_transcript | Homo_sapiens | 0 | 255 |
|
ENST00000498039
|
RNF6-004 | processed_transcript | Homo_sapiens | 0 | 366 |
