C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: popeye domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161803 Popdc3-002 ENSMUSG00000019848 10090 + 10:45289402-45318117 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161803
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161803 0.075±0.04 1.222±0.33 0.105±0.02 0.499±0.14 0.071±0.04 1.570±0.44 0.087±0.03 0.015±0.00 0.962±0.35 8.529±1.46 0.131±0.09 0.200±0.26 0.077±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082P CIL_00082P_0002 VISTA 10:44839829-45441705
CIL_00089G CIL_00089G_0002 VISTA 10:44928613-45531786
CIL_0004CC CIL_0004CC_0002 CGP 10:45178098-45369708

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IDA membrane
GO:0042391 IGI regulation of membrane potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254765 POPDC3-001 protein_coding Homo_sapiens 0 418
ENST00000429112 POPDC3-004 protein_coding Homo_sapiens 0 313
ENST00000474760 POPDC3-002 processed_transcript Homo_sapiens 0 418
ENST00000489134 POPDC3-003 processed_transcript Homo_sapiens 0 418

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