| Transcript ID | Adrenal | Breast | Muscle |
|---|---|---|---|
| ENSMUST00000161883 | 2.957±0.71 | 17.422±0.00 | 0.788±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | syndecan 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000161883  |
Sdc1-004 |
ENSMUSG00000020592 |
10090 | + |
12:8771742-8790842  |
protein_coding |
Expression Patterns
|
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001948 | IPI | glycoprotein binding |
| GO:0008092 | IEA | cytoskeletal protein binding |
| GO:0009897 | IDA | external side of plasma membrane |
| GO:0009986 | IDA | cell surface |
| GO:0060070 | IMP | canonical Wnt signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000254351
|
SDC1-001 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000381150
|
SDC1-201 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000403076
|
SDC1-002 | protein_coding | Homo_sapiens | 0 | 211 |
|
ENST00000429035
|
SDC1-005 | protein_coding | Homo_sapiens | 0 | 237 |
|
ENST00000447124
|
SDC1-004 | nonsense_mediated_decay | Homo_sapiens | 5e-34 | 148 |
|
ENST00000482879
|
SDC1-006 | processed_transcript | Homo_sapiens | 0 | 198 |
