C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphoprotein associated with glycosphingolipid microdomains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161949 Pag1-001 ENSMUSG00000027508 10090 - 3:9687479-9833679 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161949
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161949 1.615±0.17 4.668±1.28 2.432±0.30 2.087±1.03 4.992±1.94 4.125±0.63 0.589±0.16 1.267±0.24 0.944±0.30 10.690±1.62 0.508±0.25 1.574±0.73 1.463±0.59 0.617±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000088 CIL_000088_0003 CGP 3:9427011-9833679
CIL_00037R CIL_00037R_0002 CGP 3:9687479-10016607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002376 IEA immune system process
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0035556 TAS intracellular signal transduction
GO:0042169 IEA SH2 domain binding
GO:0045121 TAS membrane raft
GO:0050863 TAS regulation of T cell activation
GO:0050868 IDA negative regulation of T cell activation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220597 PAG1-001 protein_coding Homo_sapiens 0 872
ENST00000321521 PPIP5K2-001 protein_coding Homo_sapiens 0.0003 55

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