C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 21B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162044 Phf21b-003 ENSMUSG00000016624 10090 - 15:84786134-84855751 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000162044
Transcript ID Adipose Breast Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000162044 1.057±0.00 0.166±0.00 0.453±0.14 0.122±0.00 0.170±0.03 0.158±0.04 0.284±0.18 0.152±0.00 0.374±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00054G CIL_00054G_0002 CGP 15:84720052-84856049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000313237 PHF21B-001 protein_coding Homo_sapiens 0 942
ENST00000396103 PHF21B-201 protein_coding Homo_sapiens 0 1640
ENST00000403565 PHF21B-003 protein_coding Homo_sapiens 0 1520
ENST00000414269 PHF21B-010 protein_coding Homo_sapiens 0 525
ENST00000420689 PHF21B-008 protein_coding Homo_sapiens 0 749
ENST00000460507 PHF21B-011 processed_transcript Homo_sapiens 0 377
ENST00000474327 PHF21B-005 processed_transcript Homo_sapiens 0 244
ENST00000490679 PHF21B-007 processed_transcript Homo_sapiens 0 632
ENST00000491522 PHF21B-004 retained_intron Homo_sapiens 0 246
ENST00000495348 PHF21B-006 processed_transcript Homo_sapiens 0 193

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