C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162073 Alg9-002 ENSMUSG00000032059 10090 + 9:50775305-50843542 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaENSMUST00000162073
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000162073 7.914±1.06 6.686±1.90 4.736±0.00 16.815±3.97 5.381±0.98 8.724±0.94 5.125±0.43 3.290±0.71 5.178±1.04 2.013±0.00 8.090±1.92 7.510±1.97

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TF CIL_0002TF_0002 CGP 9:50752758-50775520
CIL_0003WJ CIL_0003WJ_0002 CGP 9:50768236-50843542
CIL_0003WK CIL_0003WK_0002 CGP 9:50775019-50894229

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008152 IEA metabolic process
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398006 ALG9-010 protein_coding Homo_sapiens 0 1681
ENST00000526272 ALG9-003 processed_transcript Homo_sapiens 0 472
ENST00000526587 ALG9-002 protein_coding Homo_sapiens 0 322
ENST00000527294 ALG9-016 processed_transcript Homo_sapiens 0 603
ENST00000527714 ALG9-015 retained_intron Homo_sapiens 0 593
ENST00000530723 ALG9-014 processed_transcript Homo_sapiens 0 272
ENST00000530851 ALG9-004 processed_transcript Homo_sapiens 0 291
ENST00000531154 ALG9-011 protein_coding Homo_sapiens 0 1589
ENST00000532425 ALG9-017 protein_coding Homo_sapiens 0 728
ENST00000612489 ALG9-013 nonsense_mediated_decay Homo_sapiens 0 383
ENST00000613181 ALG9-008 nonsense_mediated_decay Homo_sapiens 0 1489
ENST00000614444 ALG9-001 protein_coding Homo_sapiens 0 1681
ENST00000616540 ALG9-006 protein_coding Homo_sapiens 0 1589
ENST00000618252 ALG9-009 nonsense_mediated_decay Homo_sapiens 0 381
ENST00000619129 ALG9-007 nonsense_mediated_decay Homo_sapiens 0 1517
ENST00000622211 ALG9-001 protein_coding Homo_sapiens 0 1681

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