C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700112E06 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000162540 1700112E06Rik-002 ENSMUSG00000063458 10090 + 14:22019848-23056085 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverOvaryPlacentaENSMUST00000162540
Transcript ID Adipose Brain Breast Heart Kidney Liver Ovary Placenta
ENSMUST00000162540 2.530±0.83 0.107±0.10 0.545±0.00 0.070±0.05 0.540±0.16 0.554±0.00 1.090±0.65 0.188±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0002 UCNEbase 14:21252402-23394598
CIL_0008UO CIL_0008UO_0002 VISTA 14:21553194-22153685
CIL_000925 CIL_000925_0002 VISTA 14:21565849-22167377
CIL_00084B CIL_00084B_0002 VISTA 14:21666827-22268239
CIL_0008K8 CIL_0008K8_0002 VISTA 14:21690858-22291990
CIL_0008KK CIL_0008KK_0002 VISTA 14:21813215-22415951
CIL_0001IM CIL_0001IM_0002 CGP 14:21983962-23056085
CIL_0005E6 CIL_0005E6_0002 CGP 14:22019712-24004859

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component

Homologs

No Homologs available.

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