C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein-L-isoaspartate (D-aspartate) O-methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163085 Pcmt1-004 ENSMUSG00000019795 10090 - 10:7637730-7663261 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000163085
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000163085 7.903±0.44 9.620±2.55 20.324±9.88 4.890±0.00 10.033±1.31 8.290±0.25 25.038±9.21 6.508±0.37 7.964±3.15 16.867±3.73 70.535±22.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X2 CIL_0005X2_0002 CGP 10:7589800-7681136
CIL_00050T CIL_00050T_0002 CGP 10:7629373-7681136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004719 IDA protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
GO:0006479 IDA protein methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367378 PCMT1-004 protein_coding Homo_sapiens 0 1197
ENST00000367380 PCMT1-201 protein_coding Homo_sapiens 0 684
ENST00000367384 PCMT1-001 protein_coding Homo_sapiens 0 1070
ENST00000460828 PCMT1-006 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000464889 PCMT1-002 protein_coding Homo_sapiens 0 1129
ENST00000484601 PCMT1-003 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000486585 PCMT1-007 nonsense_mediated_decay Homo_sapiens 0 222
ENST00000494411 PCMT1-009 nonsense_mediated_decay Homo_sapiens 0 446
ENST00000495487 PCMT1-008 protein_coding Homo_sapiens 0 420
ENST00000544496 PCMT1-202 protein_coding Homo_sapiens 0 542

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