C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphofructokinase, muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163507 Pfkm-202 ENSMUSG00000033065 10090 + 15:98092589-98132447 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000163507
Transcript ID Adrenal Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000163507 12.675±4.99 53.281±29.43 2.721±0.00 11.116±8.94 10.814±0.00 615.881±220.15 10.576±6.27 6.042±0.00 38.212±9.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079B CIL_00079B_0002 CGP 15:97975602-98093744
CIL_00068J CIL_00068J_0002 CGP 15:98038744-98132447
CIL_00068I CIL_00068I_0002 CGP 15:98092589-98165625

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003872 ISS 6-phosphofructokinase activity
GO:0005515 IPI protein binding
GO:0005829 IDA cytosol
GO:0006002 IEA fructose 6-phosphate metabolic process
GO:0006096 IMP glycolytic process
GO:0008443 IDA phosphofructokinase activity
GO:0032024 IMP positive regulation of insulin secretion
GO:0042593 IMP glucose homeostasis
GO:0042803 IDA protein homodimerization activity
GO:0046835 IEA carbohydrate phosphorylation
GO:0046872 IEA metal ion binding
GO:0061615 IC glycolytic process through fructose-6-phosphate
GO:0097228 IDA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000312352 PFKM-201 protein_coding Homo_sapiens 0 3286
ENST00000340802 PFKM-001 protein_coding Homo_sapiens 0 3284
ENST00000359794 PFKM-002 protein_coding Homo_sapiens 0 3286
ENST00000546465 PFKM-020 protein_coding Homo_sapiens 0 564
ENST00000546964 PFKM-004 retained_intron Homo_sapiens 0 2159
ENST00000547148 PFKM-026 retained_intron Homo_sapiens 0 556
ENST00000547581 PFKM-003 nonsense_mediated_decay Homo_sapiens 0 2159
ENST00000547587 PFKM-005 protein_coding Homo_sapiens 0 3286
ENST00000548288 PFKM-029 protein_coding Homo_sapiens 0 303
ENST00000548345 PFKM-019 protein_coding Homo_sapiens 0 575
ENST00000548720 PFKM-016 retained_intron Homo_sapiens 0 342
ENST00000549003 PFKM-009 protein_coding Homo_sapiens 0 481
ENST00000549022 PFKM-014 protein_coding Homo_sapiens 0 643
ENST00000549366 PFKM-007 protein_coding Homo_sapiens 0 283
ENST00000549941 PFKM-010 protein_coding Homo_sapiens 0 488
ENST00000550257 PFKM-011 protein_coding Homo_sapiens 0 316
ENST00000550345 PFKM-008 protein_coding Homo_sapiens 0 691
ENST00000550802 PFKM-027 retained_intron Homo_sapiens 0 518
ENST00000550924 PFKM-028 protein_coding Homo_sapiens 0 363
ENST00000551339 PFKM-030 protein_coding Homo_sapiens 0 566
ENST00000551485 PFKM-018 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000551548 PFKM-017 processed_transcript Homo_sapiens 0 346
ENST00000551804 PFKM-006 protein_coding Homo_sapiens 0 2060
ENST00000552214 PFKM-023 retained_intron Homo_sapiens 0 475
ENST00000552752 PFKM-025 nonsense_mediated_decay Homo_sapiens 0 798
ENST00000552792 PFKM-013 protein_coding Homo_sapiens 0 337
ENST00000552818 PFKM-022 retained_intron Homo_sapiens 0 320
ENST00000552989 PFKM-021 nonsense_mediated_decay Homo_sapiens 0 617
ENST00000553055 PFKM-024 protein_coding Homo_sapiens 0 261

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