C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: deleted in liver cancer 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163663 Dlc1-005 ENSMUSG00000031523 10090 - 8:36570249-36952442 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyMuscleOvaryPlacentaTestisENSMUST00000163663
Transcript ID Adipose Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENSMUST00000163663 4.590±1.16 2.704±0.48 0.966±0.33 2.762±0.45 1.370±0.03 0.364±0.00 2.401±0.26 1.300±0.51 0.117±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VG CIL_0003VG_0002 CGP 8:36457548-36953143
CIL_000274 CIL_000274_0002 CGP 8:36567751-36995531

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0003007 IMP heart morphogenesis
GO:0005100 IEA Rho GTPase activator activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005901 IEA caveola
GO:0005925 IEA focal adhesion
GO:0006915 IEA apoptotic process
GO:0006919 IEA activation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0007165 IEA signal transduction
GO:0008285 IEA negative regulation of cell proliferation
GO:0008289 IEA lipid binding
GO:0008360 IEA regulation of cell shape
GO:0021575 IMP hindbrain morphogenesis
GO:0030036 IMP actin cytoskeleton organization
GO:0030336 IEA negative regulation of cell migration
GO:0030900 IMP forebrain development
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0032956 IEA regulation of actin cytoskeleton organization
GO:0035023 IEA regulation of Rho protein signal transduction
GO:0035024 IEA negative regulation of Rho protein signal transduction
GO:0035307 IEA positive regulation of protein dephosphorylation
GO:0042169 IEA SH2 domain binding
GO:0048041 IMP focal adhesion assembly
GO:0051497 IEA negative regulation of stress fiber assembly
GO:1900119 IEA positive regulation of execution phase of apoptosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276297 DLC1-001 protein_coding Homo_sapiens 0 4028
ENST00000316609 DLC1-003 protein_coding Homo_sapiens 0 538
ENST00000358919 DLC1-002 protein_coding Homo_sapiens 0 3565
ENST00000510250 DLC1-017 retained_intron Homo_sapiens 0 1940
ENST00000510318 DLC1-006 processed_transcript Homo_sapiens 0 1646
ENST00000511869 DLC1-004 protein_coding Homo_sapiens 0 678
ENST00000512044 DLC1-005 protein_coding Homo_sapiens 0 3570
ENST00000513883 DLC1-007 processed_transcript Homo_sapiens 0 348
ENST00000517333 DLC1-013 processed_transcript Homo_sapiens 0 279
ENST00000520226 DLC1-008 protein_coding Homo_sapiens 0 3567

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