C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6257
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163864 Gm6257-001 ENSMUSG00000091866 10090 - 9:63443166-63444075 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000163864
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000163864 0.174±0.02 0.061±0.00 0.743±0.00 0.117±0.03 0.053±0.00 0.084±0.03 0.052±0.05 0.163±0.07 0.248±0.18 0.797±0.89 1.428±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DX CIL_0008DX_0002 VISTA 9:62876076-63477276
CIL_0007L5 CIL_0007L5_0002 UCNEbase 9:63176391-63881226
CIL_0008V3 CIL_0008V3_0002 VISTA 9:63223990-63824533

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000220496 DNAJC17-001 protein_coding Homo_sapiens 0 998
ENST00000441105 AC092638.2-001 processed_pseudogene Homo_sapiens 0 274
ENST00000559238 DNAJC17-005 nonsense_mediated_decay Homo_sapiens 0 809
ENST00000559310 DNAJC17-006 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000560065 DNAJC17-011 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000560301 DNAJC17-002 retained_intron Homo_sapiens 0 390
ENST00000560645 DNAJC17-004 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000561018 DNAJC17-003 nonsense_mediated_decay Homo_sapiens 0 497
ENST00000561044 DNAJC17-007 processed_transcript Homo_sapiens 1e-38 163
ENST00000561110 DNAJC17-009 retained_intron Homo_sapiens 0 446

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