C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000220496 DNAJC17-001 ENSG00000104129 9606 - 15:40765155-40807477 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000220496
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000220496 5.564±0.00 2.641±0.00 1.795±0.97 3.956±0.00 1.287±0.51 0.694±0.35 4.172±0.00 4.457±3.92 6.313±0.00 0.646±0.00 4.320±2.19 4.188±0.96 1.896±0.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070C CIL_00070C_0001 CGP 15:40735884-40767710
CIL_00070D CIL_00070D_0001 CGP 15:40764020-40807477
CIL_000793 CIL_000793_0001 CGP 15:40765155-40807477

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:1901998 IEA toxin transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038439 Dnajc17-001 protein_coding Mus_musculus 0 1142
ENSMUST00000163864 Gm6257-001 processed_pseudogene Mus_musculus 0 998
ENSMUST00000125731 Dnajc17-002 retained_intron Mus_musculus 0 520
ENSMUST00000057454 Gchfr-001 protein_coding Mus_musculus 1.00053e-42 180

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