C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) II (DNA directed) polypeptide M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163972 Polr2m-002 ENSMUSG00000032199 10090 - 9:71478471-71484958 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000163972
Transcript ID Ovary Testis
ENSMUST00000163972 11.676±1.68 2.497±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0016591 ISS DNA-directed RNA polymerase II, holoenzyme
GO:0032774 IEA RNA biosynthetic process
GO:0043025 IMP neuronal cell body
GO:0051685 IMP maintenance of ER location

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000299638 POLR2M-001 protein_coding Homo_sapiens 0 765
ENST00000380557 POLR2M-002 protein_coding Homo_sapiens 0 494
ENST00000380568 GCOM1-002 protein_coding Homo_sapiens 6e-37 159
ENST00000380569 GCOM1-001 protein_coding Homo_sapiens 0 291
ENST00000460962 GCOM1-007 nonsense_mediated_decay Homo_sapiens 0 673
ENST00000463717 GCOM1-005 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000464277 POLR2M-005 nonsense_mediated_decay Homo_sapiens 0 300
ENST00000464308 POLR2M-003 processed_transcript Homo_sapiens 0 377
ENST00000477282 GCOM1-006 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000482814 GCOM1-004 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000482852 POLR2M-006 nonsense_mediated_decay Homo_sapiens 0 516
ENST00000484300 GCOM1-013 processed_transcript Homo_sapiens 0 396
ENST00000494490 POLR2M-004 nonsense_mediated_decay Homo_sapiens 0 717
ENST00000496627 GCOM1-003 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000509133 GCOM2-001 processed_pseudogene Homo_sapiens 0 632
ENST00000567643 POLR2M-007 processed_transcript Homo_sapiens 0 246
ENST00000587652 GCOM1-015 protein_coding Homo_sapiens 0 673

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