C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) II (DNA directed) polypeptide M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000380557 POLR2M-002 ENSG00000255529 9606 + 15:57706725-57717554 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyLiverLungMuscleOvaryTestisENST00000380557
Transcript ID Adipose Adrenal Brain Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000380557 2.695±0.00 3.509±0.00 1.861±0.00 3.936±0.00 2.864±0.31 1.590±0.00 3.886±0.00 3.622±0.38 2.635±0.48 4.134±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005635 IDA nuclear envelope
GO:0016591 IEA:IDA DNA-directed RNA polymerase II, holoenzyme
GO:0032774 IEA RNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000163972 Polr2m-002 protein_coding Mus_musculus 0 494
ENSMUST00000034720 Polr2m-001 protein_coding Mus_musculus 0 494
ENSMUST00000163998 Gcom1-002 protein_coding Mus_musculus 0 291
ENSMUST00000165936 Gcom1-003 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000164962 Gcom1-004 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000166843 Gcom1-001 protein_coding Mus_musculus 1e-36 159

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