C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polymerase (RNA) II (DNA directed) polypeptide M
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299638 POLR2M-001 ENSG00000255529 9606 + 15:57706629-57717557 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299638 6.279±0.00 6.608±0.00 1.946±0.00 7.970±0.78 4.957±2.11 4.065±1.27 4.978±0.00 4.078±3.30 4.238±1.19 2.224±0.75 6.056±0.96 5.013±0.14 5.061±2.77

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003899 IEA DNA-directed RNA polymerase activity
GO:0005635 IDA nuclear envelope
GO:0016591 IEA:IDA DNA-directed RNA polymerase II, holoenzyme
GO:0032774 IEA RNA biosynthetic process
GO:0043025 IEA neuronal cell body
GO:0051685 IEA maintenance of ER location

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034720 Polr2m-001 protein_coding Mus_musculus 0 1003
ENSMUST00000163972 Polr2m-002 protein_coding Mus_musculus 0 765
ENSMUST00000163998 Gcom1-002 protein_coding Mus_musculus 0 291
ENSMUST00000165936 Gcom1-003 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000164962 Gcom1-004 nonsense_mediated_decay Mus_musculus 0 291
ENSMUST00000169804 Polr2m-003 nonsense_mediated_decay Mus_musculus 0 222
ENSMUST00000166843 Gcom1-001 protein_coding Mus_musculus 2e-36 159

Loading