C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 354B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164280 Zfp354b-201 ENSMUSG00000020335 10090 - 11:50922291-50930933 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartLiverLungMuscleOvaryTestisENSMUST00000164280
Transcript ID Adipose Adrenal Breast Colon Heart Liver Lung Muscle Ovary Testis
ENSMUST00000164280 0.223±0.04 0.059±0.00 0.098±0.03 0.081±0.00 0.056±0.00 0.094±0.06 0.171±0.14 0.186±0.00 0.231±0.13 0.434±0.18

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003682 IDA chromatin binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000106497 zgc:113389-202 protein_coding Danio_rerio 0.0000007 60
ENSDART00000089972 zgc:113389-205 protein_coding Danio_rerio 0.0000007 60
ENSDART00000073711 zgc:113389-204 protein_coding Danio_rerio 0.0000007 60
ENSDART00000106530 zgc:171418-201 protein_coding Danio_rerio 0.000009 57
ENSDART00000106571 AL935044.2-201 protein_coding Danio_rerio 0.000009 57
ENSDART00000135397 si:dkey-1b17.7-001 protein_coding Danio_rerio 0.00003 55
ENSDART00000137419 si:ch73-299h12.4-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000122468 CU672268.1-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000145589 CT978957.2-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000075281 zgc:113372-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000123641 zgc:113372-001 protein_coding Danio_rerio 0.00003 55
ENSDART00000106229 CU694951.2-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000106379 CABZ01066717.2-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000128960 CR548626.3-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000106537 zgc:171599-202 protein_coding Danio_rerio 0.00003 55
ENSDART00000065917 zgc:171599-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000157331 zgc:171599-001 protein_coding Danio_rerio 0.00003 55
ENSDART00000063571 zgc:112958-201 protein_coding Danio_rerio 0.00003 55
ENSDART00000151890 si:dkey-22h13.3-001 protein_coding Danio_rerio 0.0001 53
ENST00000244576 ZNF391-001 protein_coding Homo_sapiens 0.000000000000007 88
ENST00000254321 ZNF700-001 protein_coding Homo_sapiens 0.000001 60
ENST00000285274 ZNF286B-003 protein_coding Homo_sapiens 0.0000000000001 84
ENST00000299687 ZNF407-001 protein_coding Homo_sapiens 0.00004 57
ENST00000304030 ZNF439-002 protein_coding Homo_sapiens 0.000001 60
ENST00000316358 ZNF133-002 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000320129 ZNF454-001 protein_coding Homo_sapiens 0.000000000003 79
ENST00000322434 ZNF354B-001 protein_coding Homo_sapiens 0 1472
ENST00000322487 ZNF726-201 protein_coding Homo_sapiens 0.00000000000001 86
ENST00000329285 ZNF599-001 protein_coding Homo_sapiens 0.000000002 69
ENST00000334241 ZNF555-001 protein_coding Homo_sapiens 0.000003 60
ENST00000335815 ZNF354A-001 protein_coding Homo_sapiens 0 1192
ENST00000355202 ZNF607-001 protein_coding Homo_sapiens 0.00002 57
ENST00000355684 ZNF44-003 protein_coding Homo_sapiens 0.0000000000006 81
ENST00000356109 ZNF44-002 protein_coding Homo_sapiens 0.0000000000008 81
ENST00000356178 ZNF527-002 nonsense_mediated_decay Homo_sapiens 0.0000000003 73
ENST00000360010 ZNF133-005 protein_coding Homo_sapiens 2e-16 90
ENST00000377671 ZNF133-001 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000393337 ZNF44-006 nonsense_mediated_decay Homo_sapiens 0.000001 60
ENST00000395835 ZNF607-002 protein_coding Homo_sapiens 0.00002 57
ENST00000395894 ZNF286A-002 protein_coding Homo_sapiens 0.0000000003 73
ENST00000396026 ZNF133-201 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000397742 ZNF44-001 nonsense_mediated_decay Homo_sapiens 0.0000009 60
ENST00000401790 ZNF133-202 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000402618 ZNF133-203 protein_coding Homo_sapiens 0.000000000000001 90
ENST00000412988 ZNF286A-003 nonsense_mediated_decay Homo_sapiens 0.0000000001 73
ENST00000413242 ZNF286A-001 nonsense_mediated_decay Homo_sapiens 0.0000000002 73
ENST00000421016 ZNF286A-201 protein_coding Homo_sapiens 0.0000000003 73
ENST00000425686 ZNF133-006 protein_coding Homo_sapiens 3e-16 90
ENST00000429654 ZNF69-002 protein_coding Homo_sapiens 0.0000008 60
ENST00000434018 ZNF133-004 protein_coding Homo_sapiens 2e-16 90
ENST00000434822 ZNF625-ZNF20-002 nonsense_mediated_decay Homo_sapiens 0.0000000003 71
ENST00000436120 ZNF527-004 protein_coding Homo_sapiens 0.0000000001 73
ENST00000439326 ZNF844-001 protein_coding Homo_sapiens 0.000003 60
ENST00000439556 ZNF625-004 protein_coding Homo_sapiens 0.0000000002 71
ENST00000455282 ZNF439-001 protein_coding Homo_sapiens 0.0000009 60
ENST00000455799 ZNF625-002 protein_coding Homo_sapiens 0.0000000003 71
ENST00000464847 ZNF286A-001 protein_coding Homo_sapiens 0.0000000003 73
ENST00000482090 ZNF700-002 protein_coding Homo_sapiens 0.000001 60
ENST00000519564 ZNF454-002 protein_coding Homo_sapiens 0.000000000002 79
ENST00000522827 ZNF454-003 retained_intron Homo_sapiens 0.0000000000007 79
ENST00000545289 ZNF286B-201 protein_coding Homo_sapiens 0.0000000000001 84
ENST00000577538 ZNF407-006 protein_coding Homo_sapiens 0.00003 57
ENST00000581829 ZNF407-005 protein_coding Homo_sapiens 0.000004 57
ENST00000583566 ZNF286A-006 protein_coding Homo_sapiens 0.00000000009 73
ENST00000584235 ZNF407-004 protein_coding Homo_sapiens 0.000005 57
ENST00000591539 ZNF555-003 protein_coding Homo_sapiens 0.0000009 60
ENST00000593105 ZNF286A-202 protein_coding Homo_sapiens 0.0000000003 73
ENST00000594466 ZNF726-005 protein_coding Homo_sapiens 0.00000000000002 86
ENST00000622593 ZNF700-201 protein_coding Homo_sapiens 0.000001 60
ENST00000622607 ZNF133-206 protein_coding Homo_sapiens 0.000000000000001 90

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