C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PCI domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337344 PCID2-002 ENSG00000126226 9606 - 13:113177577-113208711 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartKidneyLungOvaryPlacentaTestisENST00000337344
Transcript ID Adrenal Breast Heart Kidney Lung Ovary Placenta Testis
ENST00000337344 14.733±0.00 8.349±0.00 12.074±0.00 10.509±0.00 10.259±0.00 19.413±2.30 6.804±1.70 27.653±8.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00058J CIL_00058J_0002 CGP 13:113158654-113208715
CIL_0005GG CIL_0005GG_0001 CGP 13:113177539-113267108

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0043066 IMP negative regulation of apoptotic process
GO:0043488 IMP regulation of mRNA stability
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0048536 ISS spleen development
GO:0090267 IMP positive regulation of mitotic cell cycle spindle assembly checkpoint
GO:2000117 IMP negative regulation of cysteine-type endopeptidase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164416 Pcid2-001 protein_coding Mus_musculus 0 1369
ENSMUST00000168164 Pcid2-002 nonsense_mediated_decay Mus_musculus 0 996
ENSDART00000018741 pcid2-001 protein_coding Danio_rerio 0 656
ENSMUST00000167198 Pcid2-007 nonsense_mediated_decay Mus_musculus 0 560
ENSMUST00000172443 Pcid2-004 nonsense_mediated_decay Mus_musculus 0 455

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