C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: arachidonate 5-lipoxygenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164547 Alox5-004 ENSMUSG00000025701 10090 - 6:116410719-116461024 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverMuscleOvaryPlacentaENSMUST00000164547
Transcript ID Brain Breast Kidney Liver Muscle Ovary Placenta
ENSMUST00000164547 0.290±0.00 2.088±0.00 0.105±0.00 0.022±0.00 0.142±0.01 0.224±0.05 0.133±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081B CIL_00081B_0002 VISTA 6:116052182-116663911

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002540 IMP leukotriene production involved in inflammatory response
GO:0005506 IEA iron ion binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006691 IMP leukotriene metabolic process
GO:0006954 IMP inflammatory response
GO:0016702 IEA oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0019370 IDA leukotriene biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000374391 ALOX5-001 protein_coding Homo_sapiens 0 2039
ENST00000475300 ALOX5-004 processed_transcript Homo_sapiens 0 368
ENST00000483623 ALOX5-003 processed_transcript Homo_sapiens 0 267
ENST00000542434 ALOX5-201 protein_coding Homo_sapiens 0 2230
ENST00000610656 ALOX5-001 protein_coding Homo_sapiens 0 2039
ENST00000612635 ALOX5-202 protein_coding Homo_sapiens 0 1495
ENST00000616521 ALOX5-004 processed_transcript Homo_sapiens 0 368
ENST00000622021 ALOX5-203 protein_coding Homo_sapiens 0 2230
ENST00000622238 ALOX5-204 protein_coding Homo_sapiens 0 1495
ENST00000622781 ALOX5-003 processed_transcript Homo_sapiens 0 261

Loading