C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MICAL-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164584 Micall2-006 ENSMUSG00000036718 10090 - 5:139706886-139710227 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000164584
Transcript ID Testis
ENSMUST00000164584 0.265±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_0002H6 CIL_0002H6_0003 CGP 5:139543494-139736336
CIL_0000ZP CIL_0000ZP_0002 CGP 5:139706693-139775678

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297508 MICALL2-001 protein_coding Homo_sapiens 0 209
ENST00000413446 MICALL2-007 nonsense_mediated_decay Homo_sapiens 0 209
ENST00000460198 MICALL2-013 retained_intron Homo_sapiens 0 209
ENST00000467394 MICALL2-004 retained_intron Homo_sapiens 0 209
ENST00000471899 MICALL2-012 processed_transcript Homo_sapiens 0 209
ENST00000472100 MICALL2-002 retained_intron Homo_sapiens 0 209
ENST00000479007 MICALL2-005 retained_intron Homo_sapiens 0 209
ENST00000496184 MICALL2-003 retained_intron Homo_sapiens 1.4013e-45 189

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