C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6245
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000164699 Gm6245-201 ENSMUSG00000090475 10090 + 13:40778040-40778807 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000164699
Transcript ID Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000164699 0.044±0.00 0.011±0.00 0.119±0.03 0.066±0.00 0.010±0.00 0.115±0.07 0.038±0.01 0.056±0.00 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097A CIL_00097A_0002 VISTA 13:40412299-41013499
CIL_00086X CIL_00086X_0002 VISTA 13:40425554-41028254
CIL_000382 CIL_000382_0002 CGP 13:40715675-40960891

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309033 UBXN2A-001 protein_coding Homo_sapiens 0 824
ENST00000404924 UBXN2A-003 protein_coding Homo_sapiens 0 824
ENST00000446425 UBXN2A-002 processed_transcript Homo_sapiens 0 804
ENST00000479859 UBXN2A-004 retained_intron Homo_sapiens 0 196
ENST00000535786 UBXN2A-201 protein_coding Homo_sapiens 0 455
ENST00000604303 CTC-325H20.7-001 processed_pseudogene Homo_sapiens 0 387

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