C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibroblast growth factor 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165526 Fgf9-003 ENSMUSG00000021974 10090 + 14:58070547-58112337 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165526
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165526 0.200±0.00 0.568±0.11 0.515±0.10 0.196±0.00 0.055±0.02 0.274±0.12 1.125±0.00 0.045±0.03 0.032±0.01 0.054±0.00 0.106±0.02 0.018±0.00 0.044±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004MD CIL_0004MD_0002 CGP 14:57916280-58112337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0001525 IDA angiogenesis
GO:0001649 IMP osteoblast differentiation
GO:0002053 IDA positive regulation of mesenchymal cell proliferation
GO:0002062 IGI chondrocyte differentiation
GO:0006606 IMP protein import into nucleus
GO:0007267 IMP cell-cell signaling
GO:0008284 IMP positive regulation of cell proliferation
GO:0008543 IMP fibroblast growth factor receptor signaling pathway
GO:0008584 IMP male gonad development
GO:0010628 IDA positive regulation of gene expression
GO:0030178 IGI negative regulation of Wnt signaling pathway
GO:0030238 IGI male sex determination
GO:0030324 IMP lung development
GO:0030326 IMP embryonic limb morphogenesis
GO:0030949 IMP positive regulation of vascular endothelial growth factor receptor signaling pathway
GO:0032927 IDA positive regulation of activin receptor signaling pathway
GO:0042472 IMP inner ear morphogenesis
GO:0045880 IDA positive regulation of smoothened signaling pathway
GO:0048505 IMP regulation of timing of cell differentiation
GO:0048566 IMP embryonic digestive tract development
GO:0048706 IMP embryonic skeletal system development
GO:0050679 IDA positive regulation of epithelial cell proliferation
GO:0060045 IGI positive regulation of cardiac muscle cell proliferation
GO:0060484 IMP lung-associated mesenchyme development
GO:0090263 IMP positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382353 FGF9-001 protein_coding Homo_sapiens 0 767
ENST00000461657 FGF9-002 processed_transcript Homo_sapiens 0 289
ENST00000478546 FGF9-003 processed_transcript Homo_sapiens 0 595

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