C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calsequestrin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165540 Casq2-005 ENSMUSG00000027861 10090 + 3:102086546-102146514 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyOvaryPlacentaENSMUST00000165540
Transcript ID Adrenal Breast Kidney Ovary Placenta
ENSMUST00000165540 0.179±0.08 0.244±0.00 0.127±0.00 0.287±0.16 0.034±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HI CIL_0008HI_0002 VISTA 3:101762054-102363652

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0006937 TAS regulation of muscle contraction
GO:0010881 IDA regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion
GO:0016529 TAS sarcoplasmic reticulum
GO:0030018 IDA Z disc

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261448 CASQ2-001 protein_coding Homo_sapiens 0 1256
ENST00000488931 CASQ2-002 processed_transcript Homo_sapiens 1e-26 122

Loading