C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: target of myb1 homolog (chicken)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165630 Tom1-202 ENSMUSG00000042870 10090 + 8:75033686-75070121 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000165630
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000165630 7.237±2.77 6.250±1.66 5.075±0.28 5.569±3.21 3.649±2.42 10.506±3.21 4.129±3.72 10.933±0.68 5.379±2.16 4.065±2.89 12.729±2.69 4.287±2.08 10.490±4.01 16.761±4.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NE CIL_0002NE_0002 CGP 8:74993356-75070121
CIL_0002NF CIL_0002NF_0002 CGP 8:75033686-75100596

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005769 ISS early endosome
GO:0005829 ISS cytosol
GO:0006886 IEA intracellular protein transport
GO:0016020 ISS membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000382034 TOM1-201 protein_coding Homo_sapiens 0 937
ENST00000395736 TOM1-013 nonsense_mediated_decay Homo_sapiens 0 562
ENST00000404284 TOM1-003 nonsense_mediated_decay Homo_sapiens 0 797
ENST00000411850 TOM1-202 protein_coding Homo_sapiens 0 1718
ENST00000424387 TOM1-002 nonsense_mediated_decay Homo_sapiens 0 1458
ENST00000425375 TOM1-203 protein_coding Homo_sapiens 0 1026
ENST00000439512 TOM1-011 nonsense_mediated_decay Homo_sapiens 0 719
ENST00000443206 TOM1-012 protein_coding Homo_sapiens 0 610
ENST00000447733 TOM1-204 protein_coding Homo_sapiens 0 1583
ENST00000449058 TOM1-001 protein_coding Homo_sapiens 0 1731
ENST00000449508 TOM1-009 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000456128 TOM1-008 protein_coding Homo_sapiens 0 1098
ENST00000465529 TOM1-005 retained_intron Homo_sapiens 0 259
ENST00000487670 TOM1-007 retained_intron Homo_sapiens 0 339
ENST00000491987 TOM1-015 retained_intron Homo_sapiens 0 370
ENST00000497448 TOM1-014 retained_intron Homo_sapiens 0 222
ENST00000608674 TOM1-017 protein_coding Homo_sapiens 0 532
ENST00000608749 TOM1-016 protein_coding Homo_sapiens 0 575

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