C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0002NE_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000100281-ENSG00000100284 | CGP | 9606 | 22:35257452-35347994  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000100281  (HMGXB4)HMG box domain containing 4 |
ENST00000216106 (HMGXB4-002)
|
35257498-35295764 | protein_coding | |
|
ENST00000418170 (HMGXB4-001)
|
35257487-35295807 | nonsense_mediated_decay | ||
|
ENST00000420166 (HMGXB4-004)
|
35257452-35265570 | protein_coding | ||
|
ENST00000455359 (HMGXB4-003)
|
35257496-35265567 | protein_coding | ||
|
ENST00000464480 (HMGXB4-007)
|
35262763-35264663 | retained_intron | ||
|
ENST00000466438 (HMGXB4-005)
|
35257489-35258588 | processed_transcript | ||
|
ENST00000498212 (HMGXB4-008)
|
35286882-35293028 | retained_intron | ||
|
ENST00000498325 (HMGXB4-006)
|
35261854-35264052 | retained_intron | ||
|
ENSG00000100284 (TOM1) target of myb1 (chicken) |
ENST00000382034 (TOM1-201)
|
35299869-35347972 | protein_coding | |
|
ENST00000395736 (TOM1-013)
|
35299890-35323810 | nonsense_mediated_decay | ||
|
ENST00000404284 (TOM1-003)
|
35299856-35347973 | nonsense_mediated_decay | ||
|
ENST00000411850 (TOM1-202)
|
35299804-35347992 | protein_coding | ||
|
ENST00000424387 (TOM1-002)
|
35299884-35347981 | nonsense_mediated_decay | ||
|
ENST00000425375 (TOM1-203)
|
35299804-35347992 | protein_coding | ||
|
ENST00000439512 (TOM1-011)
|
35299874-35327338 | nonsense_mediated_decay | ||
|
ENST00000443206 (TOM1-012)
|
35311062-35323819 | protein_coding | ||
|
ENST00000447733 (TOM1-204)
|
35299275-35347992 | protein_coding | ||
|
ENST00000449058 (TOM1-001)
|
35299804-35347994 | protein_coding | ||
|
ENST00000449508 (TOM1-009)
|
35299894-35323874 | nonsense_mediated_decay | ||
|
ENST00000456128 (TOM1-008)
|
35299800-35333492 | protein_coding | ||
|
ENST00000465529 (TOM1-005)
|
35299866-35318316 | retained_intron | ||
|
ENST00000487670 (TOM1-007)
|
35299871-35322612 | retained_intron | ||
|
ENST00000491987 (TOM1-015)
|
35323868-35338788 | retained_intron | ||
|
ENST00000492723 (TOM1-004)
|
35344186-35347983 | retained_intron | ||
|
ENST00000497448 (TOM1-014)
|
35323340-35323914 | retained_intron | ||
|
ENST00000608674 (TOM1-017)
|
35299376-35323603 | protein_coding | ||
|
ENST00000608749 (TOM1-016)
|
35299275-35323630 | protein_coding | ||
| CIL_0002NE_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000034518-ENSMUSG00000042870 | CGP | 10090 | 8:74993356-75070121 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000034518 (Hmgxb4) HMG box domain containing 4 |
ENSMUST00000041759 (Hmgxb4-002)
|
74993356-75031972 | protein_coding | |
|
ENSMUST00000109940 (Hmgxb4-003)
|
75016222-75031913 | protein_coding | ||
|
ENSMUST00000129391 (Hmgxb4-007)
|
75022855-75024076 | retained_intron | ||
|
ENSMUST00000133585 (Hmgxb4-006)
|
74993712-75000784 | retained_intron | ||
|
ENSMUST00000134126 (Hmgxb4-004)
|
74993691-74999220 | processed_transcript | ||
|
ENSMUST00000145919 (Hmgxb4-001)
|
74993679-75031978 | nonsense_mediated_decay | ||
|
ENSMUST00000151062 (Hmgxb4-005)
|
74993679-74999798 | processed_transcript | ||
Expression Patterns
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