C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: E2F transcription factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000165922 E2f5-202 ENSMUSG00000027552 10090 + 3:14578671-14606308 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryENSMUST00000165922
Transcript ID Breast Ovary
ENSMUST00000165922 2.157±0.00 11.550±6.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071V CIL_00071V_0002 CGP 3:14533788-14606308
CIL_0006T3 CIL_0006T3_0002 CGP 3:14578671-14611285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005635 TAS nuclear envelope
GO:0005667 IEA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0009887 IMP organ morphogenesis
GO:0051726 TAS regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000256117 E2F5-007 nonsense_mediated_decay Homo_sapiens 0 989
ENST00000416274 E2F5-001 protein_coding Homo_sapiens 0 1417
ENST00000418930 E2F5-002 protein_coding Homo_sapiens 0 1430
ENST00000517476 E2F5-004 protein_coding Homo_sapiens 0 1290
ENST00000518234 E2F5-006 protein_coding Homo_sapiens 0 802
ENST00000520225 E2F5-005 protein_coding Homo_sapiens 0 302
ENST00000521234 E2F5-008 retained_intron Homo_sapiens 0 388
ENST00000521429 E2F5-003 protein_coding Homo_sapiens 0 1271
ENST00000614462 C8orf59-004 protein_coding Homo_sapiens 0 254
ENST00000619594 C8orf59-001 protein_coding Homo_sapiens 0 254

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