C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166123 Eif5-202 ENSMUSG00000021282 10090 + 12:111538101-111546753 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166123
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166123 23.499±7.25 184.212±31.95 42.939±0.23 34.768±15.75 54.917±40.88 58.855±11.63 11.724±4.73 32.462±8.15 46.493±20.85 46.388±16.83 27.222±7.93 69.679±42.96 28.558±19.04 32.003±10.11

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00016S CIL_00016S_0002 CGP 12:111538101-111656227

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003743 IEA translation initiation factor activity
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0006413 IEA translational initiation
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000019476 eif5-001 protein_coding Danio_rerio 0 684
ENSDART00000137766 eif5-002 protein_coding Danio_rerio 0 525
ENSDART00000152342 eif5-006 protein_coding Danio_rerio 0 466
ENSDART00000152533 eif5-004 protein_coding Danio_rerio 0 451
ENSDART00000134333 eif5-003 retained_intron Danio_rerio 0 200
ENST00000216554 EIF5-001 protein_coding Homo_sapiens 0 3025
ENST00000392715 EIF5-002 protein_coding Homo_sapiens 0 2715
ENST00000400019 RP11-98L4.1-001 processed_pseudogene Homo_sapiens 0 1210
ENST00000558265 EIF5-011 protein_coding Homo_sapiens 0 1066
ENST00000558316 EIF5-010 protein_coding Homo_sapiens 0 885
ENST00000558506 EIF5-003 protein_coding Homo_sapiens 0 2717
ENST00000558551 EIF5-015 retained_intron Homo_sapiens 0 952
ENST00000558800 EIF5-022 retained_intron Homo_sapiens 0 761
ENST00000559011 EIF5-018 retained_intron Homo_sapiens 0 296
ENST00000559130 EIF5-013 protein_coding Homo_sapiens 0 739
ENST00000559249 EIF5-006 retained_intron Homo_sapiens 0 946
ENST00000559532 EIF5-014 protein_coding Homo_sapiens 0 953
ENST00000559923 EIF5-017 retained_intron Homo_sapiens 0 339
ENST00000560200 EIF5-009 processed_transcript Homo_sapiens 0 688
ENST00000560338 EIF5-007 protein_coding Homo_sapiens 0 917
ENST00000560763 EIF5-008 protein_coding Homo_sapiens 0 833
ENST00000560877 EIF5-005 processed_transcript Homo_sapiens 0 547
ENST00000561023 EIF5-021 retained_intron Homo_sapiens 0 294
ENST00000561325 EIF5-012 protein_coding Homo_sapiens 0 950
ENST00000561380 EIF5-019 retained_intron Homo_sapiens 0 416
ENST00000561406 EIF5-020 processed_transcript Homo_sapiens 1e-37 159
ENST00000561439 EIF5-016 retained_intron Homo_sapiens 0 835

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