C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UBX domain protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000301935 UBXN1-002 ENSG00000162191 9606 - 11:62676498-62679090 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000301935
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000301935 52.711±0.00 49.170±0.00 1.054±0.00 7.864±0.00 21.859±20.11 15.929±12.71 9.416±8.54 7.557±6.08 9.267±4.00 30.757±27.62 37.848±32.86 69.077±60.90 70.631±19.25 44.222±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089X CIL_00089X_0001 VISTA 11:62298635-62900076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IDA proteasome complex
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA cytoplasm
GO:0031397 IDA negative regulation of protein ubiquitination
GO:0031593 IDA polyubiquitin binding
GO:0031625 IDA ubiquitin protein ligase binding
GO:0032435 IDA negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0034098 IDA Cdc48p-Npl4p-Ufd1p AAA ATPase complex
GO:0043130 IDA ubiquitin binding
GO:0043161 NAS proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051117 IPI ATPase binding
GO:0071796 IDA K6-linked polyubiquitin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000096255 Ubxn1-201 protein_coding Mus_musculus 0 1190
ENSMUST00000166407 Ubxn1-202 protein_coding Mus_musculus 0 1175

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