C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK2 associated, cullin domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166712 Cacul1-203 ENSMUSG00000033417 10090 - 19:60524696-60581023 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainColonHeartKidneyLiverLungOvaryTestisENSMUST00000166712
Transcript ID Adrenal Bladder Brain Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000166712 1.985±0.00 1.074±0.36 3.091±0.00 1.961±0.28 0.376±0.00 1.188±0.13 0.675±0.11 0.997±0.20 3.116±0.00 4.435±2.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T8 CIL_0002T8_0002 CGP 19:60466733-60581023
CIL_00062M CIL_00062M_0002 CGP 19:60524696-60759913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369151 CACUL1-001 protein_coding Homo_sapiens 0 977
ENST00000477583 CACUL1-004 retained_intron Homo_sapiens 0 451
ENST00000481360 CACUL1-005 retained_intron Homo_sapiens 0 207
ENST00000493518 CACUL1-002 nonsense_mediated_decay Homo_sapiens 0 977
ENST00000544392 CACUL1-008 processed_transcript Homo_sapiens 0 324

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