C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal RNA processing 7 homolog B (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458605 RRP7B-002 ENSG00000182841 9606 - 22:42573244-42582011 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000458605
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000458605 1.903±0.00 0.366±0.00 0.626±0.13 0.853±0.00 0.470±0.00 0.224±0.03 0.385±0.23 0.865±0.00 0.870±0.00 0.545±0.11 2.562±1.66 0.808±0.03 1.138±0.13

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018184 Rrp7a-001 protein_coding Mus_musculus 0 645
ENSMUST00000179930 Gm3436-201 processed_pseudogene Mus_musculus 0 606
ENSMUST00000166766 Rrp7a-003 nonsense_mediated_decay Mus_musculus 7.00649e-43 180
ENSMUST00000169461 Serhl-017 retained_intron Mus_musculus 0.00000000003 75
ENSMUST00000167750 Serhl-015 processed_transcript Mus_musculus 0.00000000003 75
ENSMUST00000166427 Serhl-004 protein_coding Mus_musculus 0.00000000003 75
ENSMUST00000167645 Serhl-003 retained_intron Mus_musculus 0.00000000003 75
ENSMUST00000078218 Serhl-001 protein_coding Mus_musculus 0.00000000003 75
ENSMUST00000170891 Serhl-012 processed_transcript Mus_musculus 0.0000000001 73

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