C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: melanin-concentrating hormone receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000166855 Mchr1-201 ENSMUSG00000050164 10090 + 15:81235499-81238963 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000166855
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000166855 0.207±0.14 0.378±0.19 4.050±0.07 1.900±1.15 0.298±0.12 1.082±0.21 0.038±0.00 0.954±0.17 1.399±2.10 0.710±0.19 1.668±0.64 0.780±0.47 0.306±0.28 0.221±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005W2 CIL_0005W2_0002 CGP 15:81012281-81238963
CIL_0005WB CIL_0005WB_0002 CGP 15:81235499-81360765

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IDA plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007204 IEA positive regulation of cytosolic calcium ion concentration
GO:0007218 IEA neuropeptide signaling pathway
GO:0008022 IEA protein C-terminus binding
GO:0016021 IEA integral component of membrane
GO:0030273 IEA melanin-concentrating hormone receptor activity
GO:0031513 IDA nonmotile primary cilium
GO:0042562 IEA hormone binding
GO:0051928 IEA positive regulation of calcium ion transport
GO:0060170 IDA ciliary membrane
GO:0060259 TAS regulation of feeding behavior

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249016 MCHR1-001 protein_coding Homo_sapiens 0 1576
ENST00000381433 MCHR1-003 protein_coding Homo_sapiens 0 597
ENST00000465662 MCHR1-004 processed_transcript Homo_sapiens 0 580
ENST00000498400 MCHR1-002 processed_transcript Homo_sapiens 0 1269

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