C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein tyrosine phosphatase, non-receptor type 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167080 Ptpn7-004 ENSMUSG00000031506 10090 + 1:135133309-135144920 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverMuscleOvaryPlacentaENSMUST00000167080
Transcript ID Adipose Bladder Brain Breast Kidney Liver Muscle Ovary Placenta
ENSMUST00000167080 0.306±0.03 0.397±0.00 0.121±0.00 1.445±0.00 0.090±0.02 3.649±2.05 0.167±0.24 0.292±0.16 0.239±0.05

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 TAS protein tyrosine phosphatase activity
GO:0005856 IEA cytoskeleton
GO:0006470 IMP protein dephosphorylation
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309017 PTPN7-001 protein_coding Homo_sapiens 0 1387
ENST00000358540 PTPN5-001 protein_coding Homo_sapiens 2e-24 119
ENST00000367279 PTPN7-003 protein_coding Homo_sapiens 0 1387
ENST00000396168 PTPN5-006 protein_coding Homo_sapiens 2e-24 119
ENST00000396170 PTPN5-002 protein_coding Homo_sapiens 2e-24 119
ENST00000435759 PTPN7-015 protein_coding Homo_sapiens 0 508
ENST00000462815 PTPN7-010 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000464870 PTPN7-018 protein_coding Homo_sapiens 0 568
ENST00000467283 PTPN7-017 protein_coding Homo_sapiens 0 597
ENST00000476061 PTPN7-020 protein_coding Homo_sapiens 0 630
ENST00000477554 PTPN7-005 protein_coding Homo_sapiens 0 1387
ENST00000477625 PTPN7-013 protein_coding Homo_sapiens 0 756
ENST00000477854 PTPN5-004 protein_coding Homo_sapiens 2e-24 119
ENST00000479092 PTPN7-014 processed_transcript Homo_sapiens 0 451
ENST00000480836 PTPN7-007 nonsense_mediated_decay Homo_sapiens 0 1003
ENST00000486116 PTPN7-016 protein_coding Homo_sapiens 0 553
ENST00000492977 PTPN7-004 processed_transcript Homo_sapiens 0 1085
ENST00000495688 PTPN7-011 nonsense_mediated_decay Homo_sapiens 0 1387
ENST00000496197 PTPN7-009 nonsense_mediated_decay Homo_sapiens 0 1162

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