C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167364 Trim36-202 ENSMUSG00000033949 10090 - 18:46165302-46198818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167364
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167364 0.677±0.40 0.735±0.39 0.675±0.16 0.098±0.00 0.887±0.48 5.078±1.08 0.270±0.16 0.511±0.16 0.140±0.06 1.141±0.19 0.072±0.02 0.551±0.36 1.142±0.81 51.599±29.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UO CIL_0004UO_0002 CGP 18:45268860-46212607
CIL_0004UL CIL_0004UL_0002 CGP 18:46165302-46280850

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001669 IDA acrosomal vesicle
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0007340 IMP acrosome reaction
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282369 TRIM36-001 protein_coding Homo_sapiens 0 2372
ENST00000508894 TRIM36-009 protein_coding Homo_sapiens 0 265
ENST00000510222 TRIM36-008 processed_transcript Homo_sapiens 0 383
ENST00000513154 TRIM36-004 protein_coding Homo_sapiens 0 2446
ENST00000513485 TRIM36-011 processed_transcript Homo_sapiens 0 643
ENST00000514154 TRIM36-002 protein_coding Homo_sapiens 0 2137
ENST00000515104 TRIM36-010 processed_transcript Homo_sapiens 0 603

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