C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: junctophilin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167439 Jph3-002 ENSMUSG00000025318 10090 + 8:121730567-121794276 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WG CIL_0008WG_0002 VISTA 8:121365198-121966118
CIL_00070Q CIL_00070Q_0002 CGP 8:121598703-121794276
CIL_0002SZ CIL_0002SZ_0002 CGP 8:121729623-121829569

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum
GO:0005789 IDA endoplasmic reticulum membrane
GO:0005886 IDA plasma membrane
GO:0007612 IGI learning
GO:0007613 IMP memory
GO:0015278 IMP calcium-release channel activity
GO:0016021 TAS integral component of membrane
GO:0030314 IDA junctional membrane complex
GO:0035640 IMP exploration behavior
GO:0040011 IMP locomotion
GO:0048168 IMP regulation of neuronal synaptic plasticity
GO:0050885 IGI neuromuscular process controlling balance
GO:0060314 IMP regulation of ryanodine-sensitive calcium-release channel activity
GO:0070588 IMP calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000048614 jph3-001 protein_coding Danio_rerio 0.000000000000005 88
ENST00000284262 JPH3-001 protein_coding Homo_sapiens 0 2697
ENST00000301008 JPH3-003 processed_transcript Homo_sapiens 0 654
ENST00000372980 JPH2-001 protein_coding Homo_sapiens 4e-28 132
ENST00000537256 JPH3-002 processed_transcript Homo_sapiens 0 2045
ENST00000563609 JPH3-004 processed_transcript Homo_sapiens 0 1013

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