C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167499 Arhgap8-003 ENSMUSG00000078954 10090 + 15:84720083-84758900 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLiverLungMuscleOvaryENSMUST00000167499
Transcript ID Adipose Adrenal Brain Breast Kidney Liver Lung Muscle Ovary
ENSMUST00000167499 0.152±0.08 0.044±0.00 0.026±0.01 0.194±0.06 0.182±0.03 0.013±0.00 0.920±0.23 0.027±0.01 0.299±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JU CIL_0003JU_0002 CGP 15:84669620-84772207
CIL_00054G CIL_00054G_0002 CGP 15:84720052-84856049

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336963 ARHGAP8-003 protein_coding Homo_sapiens 0 569
ENST00000352766 PRR5-ARHGAP8-001 protein_coding Homo_sapiens 0 285
ENST00000356099 ARHGAP8-004 protein_coding Homo_sapiens 0 569
ENST00000361473 PRR5-ARHGAP8-002 protein_coding Homo_sapiens 0 569
ENST00000389772 ARHGAP8-005 nonsense_mediated_decay Homo_sapiens 0 394
ENST00000389773 PRR5-ARHGAP8-201 protein_coding Homo_sapiens 0 569
ENST00000389774 ARHGAP8-001 protein_coding Homo_sapiens 0 283
ENST00000447333 ARHGAP8-013 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000460809 ARHGAP8-002 retained_intron Homo_sapiens 0 569
ENST00000498310 ARHGAP8-014 retained_intron Homo_sapiens 0 418
ENST00000515632 PRR5-ARHGAP8-003 protein_coding Homo_sapiens 0 569
ENST00000517296 PRR5-ARHGAP8-202 protein_coding Homo_sapiens 0 283
ENST00000618676 PRR5-ARHGAP8-203 protein_coding Homo_sapiens 0 569

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