C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, H+/K+ exchanging, gastric, alpha polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167761 Atp4a-003 ENSMUSG00000005553 10090 + 7:30712209-30720871 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungOvaryENSMUST00000167761
Transcript ID Breast Colon Heart Lung Ovary
ENSMUST00000167761 0.054±0.02 0.028±0.01 0.012±0.00 0.018±0.01 0.220±0.03

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104950 atp1a3a-001 protein_coding Danio_rerio 0 296
ENSDART00000005086 atp1a1b-001 protein_coding Danio_rerio 0 222
ENSDART00000049437 cdc42bpb-001 protein_coding Danio_rerio 0.0001 55
ENST00000262623 ATP4A-001 protein_coding Homo_sapiens 0 2815
ENST00000368081 ATP1A4-001 protein_coding Homo_sapiens 0.00000003 66
ENST00000418334 ATP1A4-002 processed_transcript Homo_sapiens 0.00000002 66
ENST00000469023 ATP1A4-003 retained_intron Homo_sapiens 0.00000003 66
ENST00000477338 ATP1A4-004 nonsense_mediated_decay Homo_sapiens 0.00000003 66
ENST00000592131 ATP4A-002 retained_intron Homo_sapiens 0 749

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