C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Na+/K+ transporting, alpha 1b polypeptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000005086 atp1a1b-001 ENSDARG00000019856 7955 + 9:36954480-36975127 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000005086
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000005086 118.371±84.85 2.915±2.33 2.233±1.52 0.043±0.00 14.094±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012S CIL_00012S_0001 CGP 9:36929853-36975127

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005524 IEA ATP binding
GO:0006754 IEA ATP biosynthetic process
GO:0006812 IEA cation transport
GO:0015077 IEA monovalent inorganic cation transmembrane transporter activity
GO:0015672 IEA monovalent inorganic cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0016787 IEA hydrolase activity
GO:0016820 IEA hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000005692 Atp4a-002 protein_coding Mus_musculus 0 289
ENSMUST00000036493 Atp1a1-001 protein_coding Mus_musculus 0 1709
ENSMUST00000111243 Atp1a4-001 protein_coding Mus_musculus 0 778
ENSMUST00000167761 Atp4a-003 retained_intron Mus_musculus 0 222
ENSMUST00000170371 Atp4a-001 protein_coding Mus_musculus 0 230
ENSMUST00000171014 Atp4a-004 nonsense_mediated_decay Mus_musculus 2.8026e-45 185

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