C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carbohydrate (chondroitin 6/keratan) sulfotransferase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000167915 Chst3-001 ENSMUSG00000057337 10090 - 10:60185605-60194239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000167915
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000167915 0.342±0.11 0.270±0.00 8.608±0.55 0.473±0.11 0.693±0.00 0.024±0.00 4.506±0.78 0.103±0.00 1.930±0.46 0.223±0.00 0.196±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VS CIL_0007VS_0002 VISTA 10:59667734-60271225

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005975 IEA carbohydrate metabolic process
GO:0008459 IDA chondroitin 6-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0030206 IMP chondroitin sulfate biosynthetic process
GO:0043029 IMP T cell homeostasis
GO:0050698 IMP proteoglycan sulfotransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373115 CHST3-001 protein_coding Homo_sapiens 0 1467

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