C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cilia and flagella associated protein 54
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168110 4930485B16Rik-001 ENSMUSG00000020014 10090 - 10:92775619-93081618 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168110
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168110 0.031±0.01 0.074±0.04 0.011±0.00 0.472±0.45 0.060±0.04 0.010±0.00 0.016±0.00 0.029±0.01 0.008±0.00 0.730±0.05 0.036±0.01 0.558±0.24 0.026±0.02 1.794±0.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UU CIL_0007UU_0002 VISTA 10:92255726-92857808

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342887 C12orf55-009 retained_intron Homo_sapiens 0 1286
ENST00000524981 C12orf55-003 protein_coding Homo_sapiens 0 4290
ENST00000550977 C12orf55-004 protein_coding Homo_sapiens 0 411
ENST00000554108 C12orf55-008 processed_transcript Homo_sapiens 0 1230
ENST00000556591 C12orf55-007 processed_transcript Homo_sapiens 2e-19 100

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