C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho-related BTB domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168117 Rhobtb1-003 ENSMUSG00000019944 10090 + 10:69215302-69289710 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonOvaryPlacentaTestisENSMUST00000168117
Transcript ID Adrenal Breast Colon Ovary Placenta Testis
ENSMUST00000168117 0.619±0.00 1.244±0.17 1.197±0.06 2.968±0.17 1.493±0.00 3.660±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051114 rhobtb2a-201 protein_coding Danio_rerio 1e-30 139
ENSDART00000111587 rhobtb2a-001 protein_coding Danio_rerio 1e-30 139
ENST00000337910 RHOBTB1-002 protein_coding Homo_sapiens 0 1611
ENST00000357917 RHOBTB1-001 protein_coding Homo_sapiens 0 1611
ENST00000461910 RHOBTB1-005 processed_transcript Homo_sapiens 0 296
ENST00000483488 RHOBTB1-003 processed_transcript Homo_sapiens 4e-39 165
ENST00000490827 RHOBTB1-004 processed_transcript Homo_sapiens 0 189
ENST00000496237 RHOBTB1-006 processed_transcript Homo_sapiens 0 196

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