C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tonsoku-like, DNA repair protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168185 Tonsl-001 ENSMUSG00000059323 10090 - 15:76626238-76639958 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverOvaryPlacentaTestisENSMUST00000168185
Transcript ID Adipose Adrenal Brain Breast Colon Liver Ovary Placenta Testis
ENSMUST00000168185 4.089±0.03 2.262±0.36 3.499±1.05 3.397±0.77 7.932±1.90 5.557±3.10 5.890±1.31 5.544±2.62 4.164±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0002 VISTA 15:76102685-76704351
CIL_00026P CIL_00026P_0002 CGP 15:76622088-76660117

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000724 IEA double-strand break repair via homologous recombination
GO:0005634 IEA nucleus
GO:0005662 IEA DNA replication factor A complex
GO:0031297 IEA replication fork processing
GO:0035101 IEA FACT complex
GO:0042393 IEA histone binding
GO:0042555 IEA MCM complex
GO:0043596 IEA nuclear replication fork

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000409379 TONSL-001 protein_coding Homo_sapiens 0 1779
ENST00000497613 TONSL-002 retained_intron Homo_sapiens 0 937
ENST00000613741 TONSL-201 protein_coding Homo_sapiens 0 1339

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