C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | transforming growth factor beta 1 induced transcript 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000168825  |
Tgfb1i1-006 |
ENSMUSG00000030782 |
10090 | + |
7:128248018-128253711  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00035P | CIL_00035P_0002 | CGP | 7:128237357-128253712 |
| CIL_000708 | CIL_000708_0002 | CGP | 7:128246812-128272430 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005925 | IDA | focal adhesion |
| GO:0008270 | IEA | zinc ion binding |
| GO:0016331 | IMP | morphogenesis of embryonic epithelium |
| GO:0030855 | IGI | epithelial cell differentiation |
| GO:0045165 | IGI | cell fate commitment |
| GO:0045599 | IGI | negative regulation of fat cell differentiation |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000361773
|
TGFB1I1-201 | protein_coding | Homo_sapiens | 0 | 1140 |
|
ENST00000394858
|
TGFB1I1-002 | protein_coding | Homo_sapiens | 0 | 1140 |
|
ENST00000394863
|
TGFB1I1-001 | protein_coding | Homo_sapiens | 0 | 1140 |
|
ENST00000561785
|
TGFB1I1-017 | retained_intron | Homo_sapiens | 4.06377e-44 | 182 |
|
ENST00000562165
|
TGFB1I1-018 | retained_intron | Homo_sapiens | 0 | 233 |
|
ENST00000562566
|
TGFB1I1-015 | protein_coding | Homo_sapiens | 0 | 230 |
|
ENST00000563712
|
TGFB1I1-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 1140 |
|
ENST00000564176
|
TGFB1I1-003 | retained_intron | Homo_sapiens | 0 | 316 |
|
ENST00000564804
|
TGFB1I1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 1149 |
|
ENST00000565360
|
TGFB1I1-020 | protein_coding | Homo_sapiens | 0 | 316 |
|
ENST00000565454
|
TGFB1I1-012 | protein_coding | Homo_sapiens | 0 | 316 |
|
ENST00000567066
|
TGFB1I1-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 1140 |
|
ENST00000567524
|
TGFB1I1-016 | retained_intron | Homo_sapiens | 3e-26 | 122 |
|
ENST00000567607
|
TGFB1I1-004 | protein_coding | Homo_sapiens | 0 | 1140 |
|
ENST00000568142
|
TGFB1I1-019 | retained_intron | Homo_sapiens | 0 | 324 |
|
ENST00000569254
|
TGFB1I1-014 | retained_intron | Homo_sapiens | 0 | 479 |
|
ENST00000569703
|
TGFB1I1-021 | retained_intron | Homo_sapiens | 0 | 529 |
