C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, alpha 2/delta subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168959 Cacna2d2-008 ENSMUSG00000010066 10090 + 9:107526657-107527567 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonLungMuscleOvaryPlacentaENSMUST00000168959
Transcript ID Adipose Breast Colon Lung Muscle Ovary Placenta
ENSMUST00000168959 0.145±0.00 0.367±0.14 11.447±0.00 0.289±0.00 0.103±0.00 0.964±0.00 0.333±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0002 VISTA 9:107005935-107609958

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266039 CACNA2D2-002 protein_coding Homo_sapiens 0 641
ENST00000360963 CACNA2D2-003 protein_coding Homo_sapiens 0 641
ENST00000423994 CACNA2D2-007 protein_coding Homo_sapiens 0 641
ENST00000424201 CACNA2D2-001 protein_coding Homo_sapiens 0 603
ENST00000429770 CACNA2D2-008 protein_coding Homo_sapiens 0 603
ENST00000479441 CACNA2D2-005 protein_coding Homo_sapiens 0 595
ENST00000483620 CACNA2D2-006 retained_intron Homo_sapiens 0 348

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