C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi apparatus protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169020 Glg1-001 ENSMUSG00000003316 10090 - 8:111154421-111259216 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainKidneyOvaryPlacentaTestisENSMUST00000169020
Transcript ID Adrenal Brain Kidney Ovary Placenta Testis
ENSMUST00000169020 28.257±20.07 23.806±2.70 18.791±0.00 26.566±12.83 18.054±0.00 2.136±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002I2 CIL_0002I2_0002 CGP 8:111154421-111300222

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IDA Golgi membrane
GO:0005794 IDA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0010955 IGI negative regulation of protein processing
GO:0016021 IEA integral component of membrane
GO:0030512 IMP negative regulation of transforming growth factor beta receptor signaling pathway
GO:0031012 IDA extracellular matrix
GO:0032330 IMP regulation of chondrocyte differentiation
GO:0060349 IMP bone morphogenesis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000205061 GLG1-001 protein_coding Homo_sapiens 0 4420
ENST00000422840 GLG1-002 protein_coding Homo_sapiens 0 4497
ENST00000447066 GLG1-003 protein_coding Homo_sapiens 0 4023
ENST00000561481 GLG1-006 retained_intron Homo_sapiens 0 486
ENST00000561942 GLG1-013 retained_intron Homo_sapiens 0 507
ENST00000562090 GLG1-004 nonsense_mediated_decay Homo_sapiens 0 2422
ENST00000563432 GLG1-011 retained_intron Homo_sapiens 0 630
ENST00000563646 GLG1-012 retained_intron Homo_sapiens 0 444
ENST00000565260 GLG1-008 protein_coding Homo_sapiens 0 379
ENST00000565474 GLG1-009 protein_coding Homo_sapiens 0 527
ENST00000566601 GLG1-005 retained_intron Homo_sapiens 0 387
ENST00000567951 GLG1-007 nonsense_mediated_decay Homo_sapiens 0 2375

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