C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgi glycoprotein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000422840 GLG1-002 ENSG00000090863 9606 - 16:74451959-74607094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000422840
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000422840 39.827±0.00 29.816±0.00 14.239±8.83 15.605±7.76 29.561±0.00 8.802±5.12 17.100±13.05 5.644±2.14 16.451±10.79 22.218±0.00 23.494±16.02 40.506±4.65 26.516±12.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090U CIL_00090U_0001 VISTA 16:73974670-74575347
CIL_0002I2 CIL_0002I2_0001 CGP 16:74451958-74666881

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 TAS receptor binding
GO:0005794 IDA Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0007596 TAS blood coagulation
GO:0016020 IDA:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0050900 TAS leukocyte migration
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169020 Glg1-001 protein_coding Mus_musculus 0 4497
ENSMUST00000003404 Glg1-003 protein_coding Mus_musculus 0 4021
ENSMUST00000164283 Glg1-004 nonsense_mediated_decay Mus_musculus 0 2368
ENSMUST00000168741 Glg1-002 protein_coding Mus_musculus 0 1690

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