C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002I2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000090863-ENSG00000168411 CGP 9606 16:74451958-74666881
GeneTranscriptPositionBiotype
ENSG00000090863 (GLG1)
golgi glycoprotein 1 		ENST00000205061 (GLG1-001) 74451958-74607114 protein_coding
ENST00000422840 (GLG1-002) 74451959-74607094 protein_coding
ENST00000447066 (GLG1-003) 74452027-74607112 protein_coding
ENST00000561481 (GLG1-006) 74461489-74468405 retained_intron
ENST00000561942 (GLG1-013) 74453189-74458294 retained_intron
ENST00000562090 (GLG1-004) 74452790-74607105 nonsense_mediated_decay
ENST00000563432 (GLG1-011) 74467759-74472492 retained_intron
ENST00000563646 (GLG1-012) 74461784-74463439 retained_intron
ENST00000565260 (GLG1-008) 74503736-74607097 protein_coding
ENST00000565474 (GLG1-009) 74496600-74563325 protein_coding
ENST00000566601 (GLG1-005) 74468254-74472950 retained_intron
ENST00000567911 (GLG1-010) 74474172-74477533 retained_intron
ENST00000567951 (GLG1-007) 74452790-74607098 nonsense_mediated_decay
ENSG00000168411 (RFWD3)
ring finger and WD repeat domain 3 		ENST00000361070 (RFWD3-001) 74621394-74666881 protein_coding
ENST00000571750 (RFWD3-002) 74623429-74666870 protein_coding
ENST00000571776 (RFWD3-007) 74660600-74666869 retained_intron
ENST00000572337 (RFWD3-012) 74644620-74666859 protein_coding
ENST00000572610 (RFWD3-004) 74643979-74644637 retained_intron
ENST00000572840 (RFWD3-003) 74664335-74666832 retained_intron
ENST00000572990 (RFWD3-010) 74660998-74666874 protein_coding
ENST00000575113 (RFWD3-009) 74661101-74666537 protein_coding
ENST00000575154 (RFWD3-005) 74628508-74632733 retained_intron
ENST00000575281 (RFWD3-006) 74637876-74649243 retained_intron
ENST00000575397 (RFWD3-008) 74660780-74666832 retained_intron
ENST00000576652 (RFWD3-011) 74661082-74666839 protein_coding
ENSG00000207525 (Y_RNA)
Y RNA 		ENST00000384794 (Y_RNA.1-779) 74463888-74463988 misc_RNA
ENSG00000240861 (RP11-572F4.1)
 ENST00000485799 (RP11-572F4.1-001) 74552251-74552746 processed_pseudogene
ENSG00000251794 (RNU6-237P)
RNA, U6 small nuclear 237, pseudogene 		ENST00000515985 (RNU6-237P-201) 74456541-74456611 snRNA
ENSG00000270945 (HSPE1P7)
heat shock 10kDa protein 1 pseudogene 7 		ENST00000604681 (HSPE1P7-001) 74612596-74613221 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0002I2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000003316-ENSMUSG00000033596 CGP 10090 8:111154421-111300222
GeneTranscriptPositionBiotype
ENSMUSG00000033596 (Rfwd3)
ring finger and WD repeat domain 3 		ENSMUST00000038739 (Rfwd3-201) 111270944-111300222 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002I2_0001ENSG00000090863ENST00000205061ENST00000422840ENST00000447066ENST00000561481ENST00000561942ENST00000562090ENST00000563432ENST00000563646ENST00000565260ENST00000565474ENST00000566601ENST00000567911ENST00000567951ENSG00000168411ENST00000361070ENST00000571750ENST00000571776ENST00000572337ENST00000572610ENST00000572840ENST00000572990ENST00000575113ENST00000575154ENST00000575281ENST00000575397ENST00000576652ENSG00000207525ENST00000384794ENSG00000240861ENST00000485799ENSG00000251794ENST00000515985ENSG00000270945ENST00000604681CIL_0002I2_0002ENSMUSG00000033596ENSMUST00000038739
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002I2_0001ENSG00000090863ENST00000205061ENST00000422840ENST00000447066ENST00000567951ENSG00000168411ENST00000361070ENST00000571750ENST00000575397ENSG00000207525ENST00000384794ENSG00000240861ENST00000485799ENSG00000251794ENST00000515985ENSG00000270945ENST00000604681CIL_0002I2_0002ENSMUSG00000033596ENSMUST00000038739
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090863 ENST00000205061 N/A N/A 4.659±0.00 8.194±0.00 7.808±0.00 N/A 4.563±0.00 N/A N/A 2.852±0.00 N/A 4.749±0.00 N/A 14.197±0.00
ENST00000422840 39.827±0.00 29.816±0.00 N/A 14.239±8.83 15.605±7.76 29.561±0.00 8.802±5.12 17.100±13.05 5.644±2.14 16.451±10.79 22.218±0.00 23.494±16.02 40.506±4.65 26.516±12.16
ENST00000447066 N/A N/A N/A N/A N/A 7.075±0.00 N/A N/A N/A N/A N/A 5.693±0.49 8.067±0.00 19.730±0.00
ENST00000561481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563646 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567951 N/A N/A 3.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168411 ENST00000361070 2.009±0.00 1.957±0.00 N/A 0.798±0.32 1.962±0.43 0.899±0.00 0.370±0.10 0.418±0.00 0.233±0.00 0.692±0.00 0.086±0.00 1.665±0.81 2.828±2.00 13.453±1.81
ENST00000571750 N/A N/A 0.322±0.00 0.463±0.00 N/A 1.406±0.00 N/A 0.119±0.00 N/A 0.685±0.00 0.225±0.00 0.818±0.00 N/A N/A
ENST00000571776 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575113 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575397 N/A N/A N/A N/A N/A N/A N/A 1.007±0.00 N/A N/A N/A N/A N/A N/A
ENST00000576652 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207525 ENST00000384794 0.406±0.00 0.606±0.00 N/A 1.213±0.00 0.579±0.00 N/A 0.364±0.00 N/A N/A N/A N/A N/A N/A 0.589±0.41
ENSG00000240861 ENST00000485799 N/A 0.037±0.00 N/A N/A 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000251794 ENST00000515985 0.527±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270945 ENST00000604681 N/A N/A N/A 0.270±0.00 N/A 0.245±0.00 0.041±0.00 0.045±0.00 0.082±0.00 2.916±0.00 N/A 0.160±0.00 N/A 0.054±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033596 ENSMUST00000038739 6.916±2.74 11.873±2.07 5.304±1.11 5.967±2.62 6.287±0.98 7.510±0.97 4.442±0.11 5.776±0.47 10.317±7.72 6.157±0.31 1.092±0.22 18.807±3.67 15.976±6.32 10.308±3.68

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